TSS: Hg 101251.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.08 |distance_to_tss=-92 |entrez_id=1514 |gc_percent=0.706468 |gene_alias=CATL|CTSL1|MEP |gene_description=cathepsin L |gene_name=CTSL |gene_type=pro...") |
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{{TSSDetail | {{TSSDetail | ||
|CTSL1= | |||
|MEP= | |||
|chr=chr9 | |||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
|distance_to_tss=- | |distance=NA | ||
|distance_to_tss=-152 | |||
|end=87725975 | |||
|end_of_center_position=87725968 | |||
|entrez_id=1514 | |entrez_id=1514 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
|gene_alias=CATL | |gene_alias=CATL{{!}}CTSL1{{!}}MEP | ||
|gene_description=cathepsin L | |gene_description=cathepsin L | ||
|gene_name=CTSL | |gene_name=CTSL | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000135047 | |nearest_ensembl=ENSG00000135047 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001257972 | ||
|nearest_refseq=NM_001912 | |nearest_refseq=NM_001912 | ||
|nearest_unigene=Hs.731507 | |nearest_unigene=Hs.731507 | ||
|num_trans=0 | |||
|species=human | |||
|start=87725959 | |||
|start_of_center_position=87725967 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_101251.1 | |tss_id=hg_101251.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:35, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -152 |
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| Nearest PromoterID: | NM_001257972 |
| Entrez ID: | 1514 |
| Nearest Unigene: | Hs.731507 |
| Nearest Refseq: | NM_001912 |
| Nearest Ensembl: | ENSG00000135047 |
| Gene Name: | CTSL |
| Gene Alias: | CATL|CTSL1|MEP |
| Gene Description: | cathepsin L |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |