TSS: Hg 101254.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=23530 |entrez_id=392360 |gc_percent=0.422886 |gene_alias=CTSL3|HCTSL-s |gene_description="cathepsin L family member 3, pseudogen...") |
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{{TSSDetail | {{TSSDetail | ||
|HCTSL-s= | |||
|chr=chr9 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=NA | |||
|distance_to_tss=23530 | |distance_to_tss=23530 | ||
|end=87796467 | |||
|end_of_center_position=87796446 | |||
|entrez_id=392360 | |entrez_id=392360 | ||
|gc_percent=0.422886 | |gc_percent=0.422886 | ||
|gene_alias=CTSL3 | |gene_alias=CTSL3{{!}}HCTSL-s | ||
|gene_description= | |gene_description=cathepsin L family member 3, pseudogene | ||
|gene_name=CTSL3P | |gene_name=CTSL3P | ||
|gene_type=pseudo | |gene_type=pseudo | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_001023564 | |nearest_refseq=NM_001023564 | ||
|nearest_unigene=Hs.690450 | |nearest_unigene=Hs.690450 | ||
|num_trans=0 | |||
|species=human | |||
|start=87796423 | |||
|start_of_center_position=87796445 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101254.1 | |tss_id=hg_101254.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:35, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 23530 |
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| Nearest PromoterID: | NR_027917 |
| Entrez ID: | 392360 |
| Nearest Unigene: | Hs.690450 |
| Nearest Refseq: | NM_001023564 |
| Nearest Ensembl: | ENSG00000188029 |
| Gene Name: | CTSL3P |
| Gene Alias: | CTSL3|HCTSL-s |
| Gene Description: | cathepsin L family member 3, pseudogene |
| Gene Type: | pseudo |
| CpG%: | 0.01 |
| GC%: | 0.422886 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |