TSS: Hg 101264.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=-10304 |entrez_id=645961 |gc_percent=0.437811 |gene_alias=FAM75C2 |gene_description=SPATA31 subfamily C member 2 |gene_name=SPA...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance_to_tss=- | |distance=NA | ||
|distance_to_tss=-6808 | |||
|end=88145302 | |||
|end_of_center_position=88145289 | |||
|entrez_id=645961 | |entrez_id=645961 | ||
|gc_percent=0.437811 | |gc_percent=0.437811 | ||
| Line 9: | Line 13: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001350978 | ||
|nearest_refseq=NM_001166137 | |nearest_refseq=NM_001166137 | ||
|nearest_unigene=Hs. | |nearest_unigene=Hs.632070 | ||
|num_trans=0 | |||
|species=human | |||
|start=88145275 | |||
|start_of_center_position=88145288 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101264.1 | |tss_id=hg_101264.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:36, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -6808 |
|---|---|
| Nearest PromoterID: | NM_001350978 |
| Entrez ID: | 645961 |
| Nearest Unigene: | Hs.632070 |
| Nearest Refseq: | NM_001166137 |
| Nearest Ensembl: | |
| Gene Name: | SPATA31C2 |
| Gene Alias: | FAM75C2 |
| Gene Description: | SPATA31 subfamily C member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |