TSS: Hg 101286.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.05 |distance_to_tss=-1630 |entrez_id=53358 |gc_percent=0.537313 |gene_alias=N-Shc|NSHC|RAI|SHCC |gene_description=SHC adaptor protein 3 |gene_name=S...") |
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{{TSSDetail | {{TSSDetail | ||
|NSHC= | |||
|RAI= | |||
|SHCC= | |||
|chr=chr9 | |||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
|distance_to_tss=- | |distance=NA | ||
|distance_to_tss=-1579 | |||
|end=89180406 | |||
|end_of_center_position=89180397 | |||
|entrez_id=53358 | |entrez_id=53358 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
|gene_alias=N-Shc | |gene_alias=N-Shc{{!}}NSHC{{!}}RAI{{!}}SHCC | ||
|gene_description=SHC adaptor protein 3 | |gene_description=SHC adaptor protein 3 | ||
|gene_name=SHC3 | |gene_name=SHC3 | ||
| Line 12: | Line 19: | ||
|nearest_refseq=NM_016848 | |nearest_refseq=NM_016848 | ||
|nearest_unigene=Hs.292737 | |nearest_unigene=Hs.292737 | ||
|num_trans=0 | |||
|species=human | |||
|start=89180387 | |||
|start_of_center_position=89180396 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101286.1 | |tss_id=hg_101286.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:36, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -1579 |
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| Nearest PromoterID: | NM_016848 |
| Entrez ID: | 53358 |
| Nearest Unigene: | Hs.292737 |
| Nearest Refseq: | NM_016848 |
| Nearest Ensembl: | ENSG00000148082 |
| Gene Name: | SHC3 |
| Gene Alias: | N-Shc|NSHC|RAI|SHCC |
| Gene Description: | SHC adaptor protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |