TSS: Hg 101290.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.145 |distance_to_tss=-184 |entrez_id=79048 |gc_percent=0.761194 |gene_alias=SBP2 |gene_description=SECIS binding protein 2 |gene_name=SECISBP2 |gene...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=167 | |||
|end=89318673 | |||
|end_of_center_position=89318667 | |||
|entrez_id=79048 | |entrez_id=79048 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
Line 9: | Line 13: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000187742 | |nearest_ensembl=ENSG00000187742 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001282689 | ||
|nearest_refseq=NM_024077 | |nearest_refseq=NM_024077 | ||
|nearest_unigene=Hs.59804 | |nearest_unigene=Hs.59804 | ||
|num_trans=0 | |||
|species=human | |||
|start=89318660 | |||
|start_of_center_position=89318666 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101290.1 | |tss_id=hg_101290.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 16:36, 15 June 2021
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 167 |
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Nearest PromoterID: | NM_001282689 |
Entrez ID: | 79048 |
Nearest Unigene: | Hs.59804 |
Nearest Refseq: | NM_024077 |
Nearest Ensembl: | ENSG00000187742 |
Gene Name: | SECISBP2 |
Gene Alias: | SBP2 |
Gene Description: | SECIS binding protein 2 |
Gene Type: | protein-coding |
CpG%: | 0.145 |
GC%: | 0.761194 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |