TSS: Hg 115073.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.155 |distance_to_tss=-56 |entrez_id=220359 |gc_percent=0.80597 |gene_alias=- |gene_description=tigger transposable element derived 3 |gene_name=TIGD...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=HGNC:18334 | |||
|chr=chr11 | |||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
|distance_to_tss= | |distance=0 | ||
|distance_to_tss=4 | |||
|end=65354765 | |||
|end_of_center_position=65354756 | |||
|entrez_id=220359 | |entrez_id=220359 | ||
|gc_percent=0.80597 | |gc_percent=0.80597 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=tigger transposable element derived 3 | |gene_description=tigger transposable element derived 3 | ||
|gene_name=TIGD3 | |gene_id=220359 | ||
|gene_name=tigger transposable element derived 3 | |||
|gene_source=HGNC:18334 | |||
|gene_symbol=TIGD3 | |||
|gene_synonyms= | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:18334 | |||
|nearest_ensembl=ENSG00000173825 | |nearest_ensembl=ENSG00000173825 | ||
|nearest_promoter_id=NM_145719 | |nearest_promoter_id=NM_145719 | ||
|nearest_refseq=NM_145719 | |nearest_refseq=NM_145719 | ||
|nearest_unigene=Hs.632121 | |nearest_unigene=Hs.632121 | ||
|num_trans=220359 | |||
|species=human | |||
|start=65354745 | |||
|start_of_center_position=65354755 | |||
|strand=+ | |||
|transcript_name=ENST00000309880.6 | |||
|tss_classification=yes | |||
|tss_id=hg_115073.1 | |tss_id=hg_115073.1 | ||
|tss_score=1 | |||
|uniprot_id=Q6B0B8 | |||
}} | }} | ||
Latest revision as of 23:00, 19 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 4 |
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| Nearest PromoterID: | NM_145719 |
| Entrez ID: | 220359 |
| Nearest Unigene: | Hs.632121 |
| Nearest Refseq: | NM_145719 |
| Nearest Ensembl: | ENSG00000173825 |
| Gene Name: | tigger transposable element derived 3 |
| Gene Alias: | - |
| Gene Description: | tigger transposable element derived 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.80597 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.