TSS: Hg 3086.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |chr=chr1 |cpg_percent=0.005 |distance= |distance_to_tss=7407 |end=61089717 |entrez_id=4774 |gc_percent=0.313433 |gene_alias=CTF|NF-I/A|NF1-A|NFI-A|NFI-L |gene_des...") |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|NF-I/A= | |||
|NF1-A= | |||
|NFI-A= | |||
|NFI-L= | |||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance= | |distance=NA | ||
|distance_to_tss= | |distance_to_tss=7154 | ||
|end=61089717 | |end=61089717 | ||
|end_of_center_position=61089716 | |||
|entrez_id=4774 | |entrez_id=4774 | ||
|gc_percent=0.313433 | |gc_percent=0.313433 | ||
|gene_alias=CTF | |gene_alias=BRMUTD{{!}}CTF{{!}}NF-I/A{{!}}NF1-A{{!}}NFI-A{{!}}NFI-L | ||
|gene_description=nuclear factor I A | |gene_description=nuclear factor I A | ||
|gene_name=NFIA | |gene_name=NFIA | ||
Line 18: | Line 23: | ||
|species=human | |species=human | ||
|start=61089713 | |start=61089713 | ||
|start_of_center_position=61089715 | |||
|strand=+ | |strand=+ | ||
|tata_box= | |tata_box=74(GTTTTTAAAGAA,+,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no |
Latest revision as of 19:30, 17 June 2021
Basic information about the TSS
|
| |||||||||||||
TSS cluster detected* |
---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
Distance to TSS: | 7154 |
---|---|
Nearest PromoterID: | NM_001134673 |
Entrez ID: | 4774 |
Nearest Unigene: | Hs.740757 |
Nearest Refseq: | NM_005595 |
Nearest Ensembl: | ENSG00000162599 |
Gene Name: | NFIA |
Gene Alias: | BRMUTD|CTF|NF-I/A|NF1-A|NFI-A|NFI-L |
Gene Description: | nuclear factor I A |
Gene Type: | protein-coding |
CpG%: | 0.005 |
GC%: | 0.313433 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 74(GTTTTTAAAGAA,+,0.00) |