TSS: Hg 4365.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |MUNC18C= | ||
|PSP= | |||
|UNC-18C= | |||
|all_trans=LF383828:9 MA619405:9 ENST00000483586.5:20 ENST00000370008.4:20 NM_007269:20 AK290134:25 ENST00000469338.1:28 AK312910:32 AK291322:32 AK223170:32 D63506:32 LP895150:32 BC047764:34 BC028028:35 BC038099:70 LF353107:75 MA588684:75 AF032922:79 CU690494:84 KJ892225:84 KJ897620:84 | |||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
|distance=9 | |distance=9 | ||
|distance_to_tss=- | |distance_to_tss=-32 | ||
|end=108746654 | |end=108746654 | ||
|end_of_center_position=108746642 | |||
|entrez_id=6814 | |entrez_id=6814 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
|gene_alias=MUNC18-3 | |gene_alias=MUNC18-3{{!}}MUNC18C{{!}}PSP{{!}}UNC-18C | ||
|gene_description=syntaxin binding protein 3 | |gene_description=syntaxin binding protein 3 | ||
|gene_id=6814 | |gene_id=6814 | ||
|gene_name= | |gene_name=STXBP3 | ||
|gene_source=HGNC:11446 | |gene_source=HGNC:11446 | ||
|gene_symbol=STXBP3 | |gene_symbol=STXBP3 | ||
| Line 21: | Line 25: | ||
|nearest_refseq=NM_007269 | |nearest_refseq=NM_007269 | ||
|nearest_unigene=Hs.530436 | |nearest_unigene=Hs.530436 | ||
|num_trans= | |num_trans=21 | ||
|species=human | |species=human | ||
|start=108746629 | |start=108746629 | ||
|start_of_center_position=108746641 | |||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name=LF383828 MA619405 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_4365.1 | |tss_id=hg_4365.1 | ||
Latest revision as of 00:24, 18 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -32 |
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| Nearest PromoterID: | NM_007269 |
| Entrez ID: | 6814 |
| Nearest Unigene: | Hs.530436 |
| Nearest Refseq: | NM_007269 |
| Nearest Ensembl: | ENSG00000116266 |
| Gene Name: | STXBP3 |
| Gene Alias: | MUNC18-3|MUNC18C|PSP|UNC-18C |
| Gene Description: | syntaxin binding protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.