TSS: Hg 101531.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.05 |distance_to_tss=431 |entrez_id=84909 |gc_percent=0.587065 |gene_alias=AOPEP|AP-O|APO|C90RF3|ONPEP |gene_description=chromosome 9 open reading fr...") |
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{{TSSDetail | {{TSSDetail | ||
|AP-O= | |||
|APO= | |||
|C90RF3= | |||
|ONPEP= | |||
|chr=chr9 | |||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=401 | |||
|end=94727104 | |||
|end_of_center_position=94727101 | |||
|entrez_id=84909 | |entrez_id=84909 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
|gene_alias= | |gene_alias=AP-O{{!}}APO{{!}}C90RF3{{!}}C9orf3{{!}}ONPEP | ||
|gene_description= | |gene_description=aminopeptidase O (putative) | ||
|gene_name= | |gene_name=AOPEP | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000148120 | |nearest_ensembl=ENSG00000148120 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001193331 | ||
|nearest_refseq=NM_032823 | |nearest_refseq=NM_032823 | ||
|nearest_unigene=Hs.434253 | |nearest_unigene=Hs.434253 | ||
|num_trans=0 | |||
|species=human | |||
|start=94727096 | |||
|start_of_center_position=94727100 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_101531.1 | |tss_id=hg_101531.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:42, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 401 |
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| Nearest PromoterID: | NM_001193331 |
| Entrez ID: | 84909 |
| Nearest Unigene: | Hs.434253 |
| Nearest Refseq: | NM_032823 |
| Nearest Ensembl: | ENSG00000148120 |
| Gene Name: | AOPEP |
| Gene Alias: | AP-O|APO|C90RF3|C9orf3|ONPEP |
| Gene Description: | aminopeptidase O (putative) |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |