TSS: Hg 101538.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=-57863 |entrez_id=100422842 |gc_percent=0.39801 |gene_alias=mir-3074 |gene_description=microRNA 3074 |gene_name=MIR3074 |gene_type=...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance=NA | |||
|distance_to_tss=-57863 | |distance_to_tss=-57863 | ||
|end=95143963 | |||
|end_of_center_position=95143958 | |||
|entrez_id=100422842 | |entrez_id=100422842 | ||
|gc_percent=0.39801 | |gc_percent=0.39801 | ||
Line 12: | Line 16: | ||
|nearest_refseq=NR_036109 | |nearest_refseq=NR_036109 | ||
|nearest_unigene= | |nearest_unigene= | ||
|tata_box= | |num_trans=0 | ||
|species=human | |||
|start=95143951 | |||
|start_of_center_position=95143957 | |||
|strand=- | |||
|tata_box=15(TCTTTTAAACAG,+,0.00),38(CCCTCTTTATGG,-,0.00) | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101538.1 | |tss_id=hg_101538.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 16:42, 15 June 2021
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | -57863 |
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Nearest PromoterID: | NR_036109 |
Entrez ID: | 100422842 |
Nearest Unigene: | |
Nearest Refseq: | NR_036109 |
Nearest Ensembl: | ENSG00000207617 |
Gene Name: | MIR3074 |
Gene Alias: | mir-3074 |
Gene Description: | microRNA 3074 |
Gene Type: | ncRNA |
CpG%: | 0 |
GC%: | 0.39801 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 15(TCTTTTAAACAG,+,0.00),38(CCCTCTTTATGG,-,0.00) |