TSS: Hg 101540.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=-103825 |entrez_id=100422842 |gc_percent=0.487562 |gene_alias=mir-3074 |gene_description=microRNA 3074 |gene_name=MIR3074 |gene...") |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|all_trans=AF086119:5 | |||
|chr=chr9 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=5 | |||
|distance_to_tss=-103825 | |distance_to_tss=-103825 | ||
|end=95189925 | |||
|end_of_center_position=95189919 | |||
|entrez_id=100422842 | |entrez_id=100422842 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
Line 12: | Line 17: | ||
|nearest_refseq=NR_036109 | |nearest_refseq=NR_036109 | ||
|nearest_unigene= | |nearest_unigene= | ||
|num_trans=1 | |||
|species=human | |||
|start=95189912 | |||
|start_of_center_position=95189918 | |||
|strand=- | |||
|transcript_name=AF086119 | |||
|tss_classification=yes | |||
|tss_id=hg_101540.1 | |tss_id=hg_101540.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 09:45, 11 May 2019
Basic information about the TSS
|
| |||||||||||||
TSS cluster detected* |
---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
Distance to TSS: | -103825 |
---|---|
Nearest PromoterID: | NR_036109 |
Entrez ID: | 100422842 |
Nearest Unigene: | |
Nearest Refseq: | NR_036109 |
Nearest Ensembl: | ENSG00000207617 |
Gene Name: | MIR3074 |
Gene Alias: | mir-3074 |
Gene Description: | microRNA 3074 |
Gene Type: | ncRNA |
CpG%: | 0.005 |
GC%: | 0.487562 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |