TSS: Hg 101545.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|FAC= | |||
|FACC= | |||
|chr=chr9 | |||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance=NA | |||
|distance_to_tss=106157 | |distance_to_tss=106157 | ||
|end=95211103 | |||
|end_of_center_position=95211097 | |||
|entrez_id=2176 | |entrez_id=2176 | ||
|gc_percent=0.402985 | |gc_percent=0.402985 | ||
|gene_alias=FA3 | |gene_alias=FA3{{!}}FAC{{!}}FACC | ||
|gene_description= | |gene_description=FA complementation group C | ||
|gene_name=FANCC | |gene_name=FANCC | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_000136 | |nearest_refseq=NM_000136 | ||
|nearest_unigene=Hs.494529 | |nearest_unigene=Hs.494529 | ||
|tata_box= | |num_trans=0 | ||
|species=human | |||
|start=95211090 | |||
|start_of_center_position=95211096 | |||
|strand=- | |||
|tata_box=74(GCTTTAAAATCC,+,0.00) | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101545.1 | |tss_id=hg_101545.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:42, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 106157 |
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| Nearest PromoterID: | NM_001243743 |
| Entrez ID: | 2176 |
| Nearest Unigene: | Hs.494529 |
| Nearest Refseq: | NM_000136 |
| Nearest Ensembl: | ENSG00000158169 |
| Gene Name: | FANCC |
| Gene Alias: | FA3|FAC|FACC |
| Gene Description: | FA complementation group C |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.402985 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 74(GCTTTAAAATCC,+,0.00) |