TSS: Hg 101615.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|CTSL2= | |||
|CTSU= | |||
|all_trans=HGNC:2538 | |||
|chr=chr9 | |||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance_to_tss= | |distance=0 | ||
|distance_to_tss=1 | |||
|end=97039150 | |||
|end_of_center_position=97039142 | |||
|entrez_id=1515 | |entrez_id=1515 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
|gene_alias=CATL2 | |gene_alias=CATL2{{!}}CTSL2{{!}}CTSU | ||
|gene_description=cathepsin V | |gene_description=cathepsin V | ||
|gene_name=CTSV | |gene_id=1515 | ||
|gene_name=cathepsin V | |||
|gene_source=HGNC:2538 | |||
|gene_symbol=CTSV | |||
|gene_synonyms=CTSU | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:2538 | |||
|nearest_ensembl=ENSG00000136943 | |nearest_ensembl=ENSG00000136943 | ||
|nearest_promoter_id=NM_001333 | |nearest_promoter_id=NM_001333 | ||
|nearest_refseq=NM_001333 | |nearest_refseq=NM_001333 | ||
|nearest_unigene=Hs.610096 | |nearest_unigene=Hs.610096 | ||
|num_trans=1515 | |||
|species=human | |||
|start=97039132 | |||
|start_of_center_position=97039141 | |||
|strand=- | |||
|transcript_name=ENST00000259470.6 ENST00000681927.1 ENST00000680385.1 ENST00000680221.1 ENST00000681737.1 ENST00000680435.1 ENST00000680787.1 ENST00000681330.1 ENST00000479932.2 AB001928 AK310740 AK310645 | |||
|tss_classification=yes | |||
|tss_id=hg_101615.1 | |tss_id=hg_101615.1 | ||
|tss_score=1 | |||
|uniprot_id=A0A024R141 O60911 | |||
}} | }} | ||
Latest revision as of 18:09, 19 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 1 |
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| Nearest PromoterID: | NM_001333 |
| Entrez ID: | 1515 |
| Nearest Unigene: | Hs.610096 |
| Nearest Refseq: | NM_001333 |
| Nearest Ensembl: | ENSG00000136943 |
| Gene Name: | cathepsin V |
| Gene Alias: | CATL2|CTSL2|CTSU |
| Gene Description: | cathepsin V |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.