TSS: Hg 101616.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=NA | |||
|distance_to_tss=-49722 | |distance_to_tss=-49722 | ||
|end=97188712 | |||
|end_of_center_position=97188705 | |||
|entrez_id=57653 | |entrez_id=57653 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
|gene_alias=- | |gene_alias=LOC100499484-C9ORF174 | ||
|gene_description= | |gene_description=SUGT1P4-STRA6LP-CCDC180 readthrough | ||
|gene_name= | |gene_name=SUGT1P4-STRA6LP-CCDC180 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|nearest_ensembl=ENSG00000255036 | |nearest_ensembl=ENSG00000255036 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NR_036527 | |nearest_refseq=NR_036527 | ||
|nearest_unigene=Hs.435629 | |nearest_unigene=Hs.435629 | ||
|num_trans=0 | |||
|species=human | |||
|start=97188696 | |||
|start_of_center_position=97188704 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101616.1 | |tss_id=hg_101616.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:44, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -49722 |
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| Nearest PromoterID: | NR_036527 |
| Entrez ID: | 57653 |
| Nearest Unigene: | Hs.435629 |
| Nearest Refseq: | NR_036527 |
| Nearest Ensembl: | ENSG00000255036 |
| Gene Name: | SUGT1P4-STRA6LP-CCDC180 |
| Gene Alias: | LOC100499484-C9ORF174 |
| Gene Description: | SUGT1P4-STRA6LP-CCDC180 readthrough |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |