TSS: Hg 101620.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=25257 |entrez_id=23424 |gc_percent=0.497512 |gene_alias=CATC4|PCTAIRE2BP|TRAP |gene_description=tudor domain containing 7 |gene...") |
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{{TSSDetail | {{TSSDetail | ||
|PCTAIRE2BP= | |||
|TRAP= | |||
|chr=chr9 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=25181 | |||
|end=97437290 | |||
|end_of_center_position=97437278 | |||
|entrez_id=23424 | |entrez_id=23424 | ||
|gc_percent=0.497512 | |gc_percent=0.497512 | ||
|gene_alias=CATC4 | |gene_alias=CATC4{{!}}PCTAIRE2BP{{!}}TRAP | ||
|gene_description=tudor domain containing 7 | |gene_description=tudor domain containing 7 | ||
|gene_name=TDRD7 | |gene_name=TDRD7 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_014290 | |nearest_refseq=NM_014290 | ||
|nearest_unigene=Hs.193842 | |nearest_unigene=Hs.193842 | ||
|num_trans=0 | |||
|species=human | |||
|start=97437264 | |||
|start_of_center_position=97437277 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101620.1 | |tss_id=hg_101620.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:44, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 25181 |
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| Nearest PromoterID: | NM_014290 |
| Entrez ID: | 23424 |
| Nearest Unigene: | Hs.193842 |
| Nearest Refseq: | NM_014290 |
| Nearest Ensembl: | ENSG00000196116 |
| Gene Name: | TDRD7 |
| Gene Alias: | CATC4|PCTAIRE2BP|TRAP |
| Gene Description: | tudor domain containing 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |