TSS: Hg 101654.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|PHAPI2= | |||
|SSP29= | |||
|chr=chr9 | |||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=1392 | |||
|end=97984740 | |||
|end_of_center_position=97984733 | |||
|entrez_id=10541 | |entrez_id=10541 | ||
|gc_percent=0.800995 | |gc_percent=0.800995 | ||
|gene_alias=APRIL | |gene_alias=APRIL{{!}}PHAPI2{{!}}SSP29 | ||
|gene_description=acidic nuclear phosphoprotein 32 family member B | |gene_description=acidic nuclear phosphoprotein 32 family member B | ||
|gene_name=ANP32B | |gene_name=ANP32B | ||
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|nearest_refseq=NM_006401 | |nearest_refseq=NM_006401 | ||
|nearest_unigene=Hs.730654 | |nearest_unigene=Hs.730654 | ||
|tata_box= | |num_trans=0 | ||
|species=human | |||
|start=97984725 | |||
|start_of_center_position=97984732 | |||
|strand=- | |||
|tata_box=-80(GCCCTTTTAAGA,-,0.00),-78(CCTTTTAAGAAG,+,0.00) | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_101654.1 | |tss_id=hg_101654.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:45, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 1392 |
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| Nearest PromoterID: | NM_006401 |
| Entrez ID: | 10541 |
| Nearest Unigene: | Hs.730654 |
| Nearest Refseq: | NM_006401 |
| Nearest Ensembl: | ENSG00000136938 |
| Gene Name: | ANP32B |
| Gene Alias: | APRIL|PHAPI2|SSP29 |
| Gene Description: | acidic nuclear phosphoprotein 32 family member B |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -80(GCCCTTTTAAGA,-,0.00),-78(CCTTTTAAGAAG,+,0.00) |