TSS: Hg 101704.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=-45647 |entrez_id=7046 |gc_percent=0.522388 |gene_alias=AAT5|ACVRLK4|ALK-5|ALK5|ESS1|LDS1|LDS1A|LDS2A|MSSE|SKR4|TGFR-1|tbetaR-I...") |
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{{TSSDetail | {{TSSDetail | ||
|ACVRLK4= | |||
|ALK-5= | |||
|ALK5= | |||
|ESS1= | |||
|LDS1= | |||
|LDS1A= | |||
|LDS2A= | |||
|MSSE= | |||
|SKR4= | |||
|TGFR-1= | |||
|chr=chr9 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance_to_tss=- | |distance=NA | ||
|distance_to_tss=-45671 | |||
|end=99059450 | |||
|end_of_center_position=99059442 | |||
|entrez_id=7046 | |entrez_id=7046 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
|gene_alias=AAT5 | |gene_alias=AAT5{{!}}ACVRLK4{{!}}ALK-5{{!}}ALK5{{!}}ESS1{{!}}LDS1{{!}}LDS1A{{!}}LDS2A{{!}}MSSE{{!}}SKR4{{!}}TBR-i{{!}}TBRI{{!}}TGFR-1{{!}}tbetaR-I | ||
|gene_description=transforming growth factor beta receptor 1 | |gene_description=transforming growth factor beta receptor 1 | ||
|gene_name=TGFBR1 | |gene_name=TGFBR1 | ||
| Line 12: | Line 26: | ||
|nearest_refseq=NM_004612 | |nearest_refseq=NM_004612 | ||
|nearest_unigene=Hs.494622 | |nearest_unigene=Hs.494622 | ||
|num_trans=0 | |||
|species=human | |||
|start=99059433 | |||
|start_of_center_position=99059441 | |||
|strand=- | |||
|tbetaR-I= | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101704.1 | |tss_id=hg_101704.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:46, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -45671 |
|---|---|
| Nearest PromoterID: | NM_001130916 |
| Entrez ID: | 7046 |
| Nearest Unigene: | Hs.494622 |
| Nearest Refseq: | NM_004612 |
| Nearest Ensembl: | ENSG00000106799 |
| Gene Name: | TGFBR1 |
| Gene Alias: | AAT5|ACVRLK4|ALK-5|ALK5|ESS1|LDS1|LDS1A|LDS2A|MSSE|SKR4|TBR-i|TBRI|TGFR-1|tbetaR-I |
| Gene Description: | transforming growth factor beta receptor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |