TSS: Hg 119050.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=HGNC:50700 | |||
|chr=chr11 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=0 | |||
|distance_to_tss=32 | |distance_to_tss=32 | ||
|end=27218742 | |||
|end_of_center_position=27218736 | |||
|entrez_id=103695435 | |entrez_id=103695435 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=BBOX1 antisense RNA 1 | |gene_description=BBOX1 antisense RNA 1 | ||
|gene_name=BBOX1-AS1 | |gene_id=103695435 | ||
|gene_name=BBOX1 antisense RNA 1 | |||
|gene_source=HGNC:50700 | |||
|gene_symbol=BBOX1-AS1 | |||
|gene_synonyms= | |||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:50700 | |||
|nearest_ensembl=ENSG00000254560 | |nearest_ensembl=ENSG00000254560 | ||
|nearest_promoter_id=NR_125768 | |nearest_promoter_id=NR_125768 | ||
|nearest_refseq=NR_125766 | |nearest_refseq=NR_125766 | ||
|nearest_unigene=Hs.196133 | |nearest_unigene=Hs.196133 | ||
|tata_box= | |num_trans=103695435 | ||
|species=human | |||
|start=27218729 | |||
|start_of_center_position=27218735 | |||
|strand=- | |||
|tata_box=12(GCTTTTAGATGG,+,0.00) | |||
|transcript_name=ENST00000526061.5 | |||
|tss_classification=no | |||
|tss_id=hg_119050.1 | |tss_id=hg_119050.1 | ||
|tss_score=1 | |||
|uniprot_id= | |||
}} | }} | ||
Latest revision as of 00:27, 20 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 32 |
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| Nearest PromoterID: | NR_125768 |
| Entrez ID: | 103695435 |
| Nearest Unigene: | Hs.196133 |
| Nearest Refseq: | NR_125766 |
| Nearest Ensembl: | ENSG00000254560 |
| Gene Name: | BBOX1 antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | BBOX1 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 12(GCTTTTAGATGG,+,0.00) |
TSS expression
Expression data not found.