TSS: Hg 101706.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.075 |distance_to_tss=-18 |entrez_id=85365 |gc_percent=0.636816 |gene_alias=CDG1I|CDGIi|CMS14|CMSTA3|NET38|hALPG2 |gene_description="ALG2, alpha-1,3/...") |
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{{TSSDetail | {{TSSDetail | ||
|CDGIi= | |||
|CMS14= | |||
|CMSTA3= | |||
|NET38= | |||
|all_trans=LF206456:0 MA442033:0 ENST00000476832.2:30 ENST00000238477.5:30 NR_024532:30 NM_033087:30 AK074988:30 AK075172:32 DQ570480:37 AB161356:51 AK027417:56 AK074704:56 BC017876:58 KJ895084:74 DQ891989:76 DQ895179:76 CU676096:77 LF354592:359 MA590169:359 | |||
|chr=chr9 | |||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
|distance_to_tss=- | |distance=0 | ||
|distance_to_tss=-40 | |||
|end=99221992 | |||
|end_of_center_position=99221982 | |||
|entrez_id=85365 | |entrez_id=85365 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
|gene_alias=CDG1I | |gene_alias=CDG1I{{!}}CDGIi{{!}}CMS14{{!}}CMSTA3{{!}}NET38{{!}}hALPG2 | ||
|gene_description= | |gene_description=ALG2 alpha-1,3/1,6-mannosyltransferase | ||
|gene_id=85365 | |||
|gene_name=ALG2 | |gene_name=ALG2 | ||
|gene_source=HGNC:23159 | |||
|gene_symbol=ALG2 | |||
|gene_synonyms=CDGIi FLJ14511 NET38 hALPG2 | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hALPG2= | |||
|hgnc_mgi_id=HGNC:23159 | |||
|nearest_ensembl=ENSG00000119523 | |nearest_ensembl=ENSG00000119523 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_033087 | ||
|nearest_refseq=NM_033087 | |nearest_refseq=NM_033087 | ||
|nearest_unigene=Hs.40919 | |nearest_unigene=Hs.40919 | ||
|num_trans=19 | |||
|species=human | |||
|start=99221971 | |||
|start_of_center_position=99221981 | |||
|strand=- | |||
|transcript_name=LF206456 MA442033 | |||
|tss_classification=yes | |||
|tss_id=hg_101706.1 | |tss_id=hg_101706.1 | ||
|tss_score=1 | |||
|uniprot_id=Q9H553 | |||
}} | }} | ||
Latest revision as of 16:46, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -40 |
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| Nearest PromoterID: | NM_033087 |
| Entrez ID: | 85365 |
| Nearest Unigene: | Hs.40919 |
| Nearest Refseq: | NM_033087 |
| Nearest Ensembl: | ENSG00000119523 |
| Gene Name: | ALG2 |
| Gene Alias: | CDG1I|CDGIi|CMS14|CMSTA3|NET38|hALPG2 |
| Gene Description: | ALG2 alpha-1,3/1,6-mannosyltransferase |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.