TSS: Hg 101733.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|L8= | |||
|chr=chr9 | |||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=NA | |||
|distance_to_tss=-132 | |distance_to_tss=-132 | ||
|end=100429392 | |||
|end_of_center_position=100429383 | |||
|entrez_id=91283 | |entrez_id=91283 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
|gene_alias=C9orf30 | |gene_alias=C9orf30{{!}}L8 | ||
|gene_description=Myb/SANT DNA binding domain containing 3 | |gene_description=Myb/SANT DNA binding domain containing 3 | ||
|gene_name=MSANTD3 | |gene_name=MSANTD3 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_080655 | |nearest_refseq=NM_080655 | ||
|nearest_unigene=Hs.530272 | |nearest_unigene=Hs.530272 | ||
|num_trans=0 | |||
|species=human | |||
|start=100429372 | |||
|start_of_center_position=100429382 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101733.1 | |tss_id=hg_101733.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:47, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -132 |
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| Nearest PromoterID: | NM_001198806 |
| Entrez ID: | 91283 |
| Nearest Unigene: | Hs.530272 |
| Nearest Refseq: | NM_080655 |
| Nearest Ensembl: | ENSG00000066697 |
| Gene Name: | MSANTD3 |
| Gene Alias: | C9orf30|L8 |
| Gene Description: | Myb/SANT DNA binding domain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |