TSS: Hg 101749.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=10789 |entrez_id=229 |gc_percent=0.517413 |gene_alias=ALDB|ALDO2 |gene_description="aldolase, fructose-bisphosphate B" |gene_na...") |
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{{TSSDetail | {{TSSDetail | ||
|ALDO2= | |||
|chr=chr9 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=10783 | |||
|end=101425015 | |||
|end_of_center_position=101424991 | |||
|entrez_id=229 | |entrez_id=229 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
|gene_alias=ALDB | |gene_alias=ALDB{{!}}ALDO2 | ||
|gene_description= | |gene_description=aldolase, fructose-bisphosphate B | ||
|gene_name=ALDOB | |gene_name=ALDOB | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_000035 | |nearest_refseq=NM_000035 | ||
|nearest_unigene=Hs.530274 | |nearest_unigene=Hs.530274 | ||
|tata_box= | |num_trans=0 | ||
|species=human | |||
|start=101424966 | |||
|start_of_center_position=101424990 | |||
|strand=- | |||
|tata_box=-100(GGGTATATAAGG,-,0.00) | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101749.1 | |tss_id=hg_101749.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:47, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 10783 |
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| Nearest PromoterID: | NM_000035 |
| Entrez ID: | 229 |
| Nearest Unigene: | Hs.530274 |
| Nearest Refseq: | NM_000035 |
| Nearest Ensembl: | ENSG00000136872 |
| Gene Name: | ALDOB |
| Gene Alias: | ALDB|ALDO2 |
| Gene Description: | aldolase, fructose-bisphosphate B |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -100(GGGTATATAAGG,-,0.00) |