TSS: Hg 101773.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|bA785H23.1= | |||
|chr=chr9 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=NA | |||
|distance_to_tss=132973 | |distance_to_tss=132973 | ||
|end=102652613 | |||
|end_of_center_position=102652610 | |||
|entrez_id=414319 | |entrez_id=414319 | ||
|gc_percent=0.383085 | |gc_percent=0.383085 | ||
|gene_alias=C9orf107 | |gene_alias=C9orf107{{!}}bA785H23.1 | ||
|gene_description=long intergenic non-protein coding RNA 587 | |gene_description=long intergenic non-protein coding RNA 587 | ||
|gene_name=LINC00587 | |gene_name=LINC00587 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NR_103830 | |nearest_refseq=NR_103830 | ||
|nearest_unigene=Hs.385790 | |nearest_unigene=Hs.385790 | ||
|num_trans=0 | |||
|species=human | |||
|start=102652606 | |||
|start_of_center_position=102652609 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101773.1 | |tss_id=hg_101773.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:48, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 132973 |
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| Nearest PromoterID: | NR_103830 |
| Entrez ID: | 414319 |
| Nearest Unigene: | Hs.385790 |
| Nearest Refseq: | NR_103830 |
| Nearest Ensembl: | ENSG00000204250 |
| Gene Name: | LINC00587 |
| Gene Alias: | C9orf107|bA785H23.1 |
| Gene Description: | long intergenic non-protein coding RNA 587 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.383085 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |