TSS: Hg 101784.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=19105 |entrez_id=55335 |gc_percent=0.368159 |gene_alias=FP944|NIPSNAP3|SNAP1 |gene_description=nipsnap homolog 3B |gene_name=NIPSNA...") |
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{{TSSDetail | {{TSSDetail | ||
|NIPSNAP3= | |||
|SNAP1= | |||
|all_trans=LF354637:221 MA590214:221 LF354638:-238 MA590215:-238 | |||
|chr=chr9 | |||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance_to_tss= | |distance=221 | ||
|distance_to_tss=18717 | |||
|end=104782854 | |||
|end_of_center_position=104782846 | |||
|entrez_id=55335 | |entrez_id=55335 | ||
|gc_percent=0.368159 | |gc_percent=0.368159 | ||
|gene_alias=FP944 | |gene_alias=FP944{{!}}NIPSNAP3{{!}}SNAP1 | ||
|gene_description=nipsnap homolog 3B | |gene_description=nipsnap homolog 3B | ||
|gene_name=NIPSNAP3B | |gene_name=NIPSNAP3B | ||
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|nearest_refseq=NM_018376 | |nearest_refseq=NM_018376 | ||
|nearest_unigene=Hs.429294 | |nearest_unigene=Hs.429294 | ||
|num_trans=4 | |||
|species=human | |||
|start=104782837 | |||
|start_of_center_position=104782845 | |||
|strand=- | |||
|transcript_name=LF354637 MA590214 | |||
|tss_classification=no | |||
|tss_id=hg_101784.1 | |tss_id=hg_101784.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:48, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 18717 |
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| Nearest PromoterID: | NR_130760 |
| Entrez ID: | 55335 |
| Nearest Unigene: | Hs.429294 |
| Nearest Refseq: | NM_018376 |
| Nearest Ensembl: | ENSG00000165028 |
| Gene Name: | NIPSNAP3B |
| Gene Alias: | FP944|NIPSNAP3|SNAP1 |
| Gene Description: | nipsnap homolog 3B |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.368159 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |