TSS: Hg 10181.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=3507 |entrez_id=765 |gc_percent=0.577114 |gene_alias=CA-VI|GUSTIN |gene_description=carbonic anhydrase 6 |gene_name=CA6 |gene_ty...") |
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{{TSSDetail | {{TSSDetail | ||
|GUSTIN= | |||
|chr=chr1 | |||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=3473 | |||
|end=8949361 | |||
|end_of_center_position=8949341 | |||
|entrez_id=765 | |entrez_id=765 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
|gene_alias=CA-VI | |gene_alias=CA-VI{{!}}GUSTIN | ||
|gene_description=carbonic anhydrase 6 | |gene_description=carbonic anhydrase 6 | ||
|gene_name=CA6 | |gene_name=CA6 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000131686 | |nearest_ensembl=ENSG00000131686 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001270500 | ||
|nearest_refseq=NM_001215 | |nearest_refseq=NM_001215 | ||
|nearest_unigene=Hs.100322 | |nearest_unigene=Hs.100322 | ||
|num_trans=0 | |||
|species=human | |||
|start=8949320 | |||
|start_of_center_position=8949340 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_10181.1 | |tss_id=hg_10181.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:48, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 3473 |
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| Nearest PromoterID: | NM_001270500 |
| Entrez ID: | 765 |
| Nearest Unigene: | Hs.100322 |
| Nearest Refseq: | NM_001215 |
| Nearest Ensembl: | ENSG00000131686 |
| Gene Name: | CA6 |
| Gene Alias: | CA-VI|GUSTIN |
| Gene Description: | carbonic anhydrase 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |