TSS: Hg 101827.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.08 |distance_to_tss=978 |entrez_id=23446 |gc_percent=0.656716 |gene_alias=CD92|CDW92|CHTL1|CTL1 |gene_description=solute carrier family 44 member 1...") |
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{{TSSDetail | {{TSSDetail | ||
|CDW92= | |||
|CHTL1= | |||
|CTL1= | |||
|chr=chr9 | |||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=940 | |||
|end=105245610 | |||
|end_of_center_position=105245592 | |||
|entrez_id=23446 | |entrez_id=23446 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
|gene_alias=CD92 | |gene_alias=CD92{{!}}CDW92{{!}}CHTL1{{!}}CTL1 | ||
|gene_description=solute carrier family 44 member 1 | |gene_description=solute carrier family 44 member 1 | ||
|gene_name=SLC44A1 | |gene_name=SLC44A1 | ||
Line 12: | Line 19: | ||
|nearest_refseq=NM_022109 | |nearest_refseq=NM_022109 | ||
|nearest_unigene=Hs.573495 | |nearest_unigene=Hs.573495 | ||
|num_trans=0 | |||
|species=human | |||
|start=105245572 | |||
|start_of_center_position=105245591 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_101827.1 | |tss_id=hg_101827.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 16:49, 15 June 2021
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 940 |
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Nearest PromoterID: | NM_001286730 |
Entrez ID: | 23446 |
Nearest Unigene: | Hs.573495 |
Nearest Refseq: | NM_022109 |
Nearest Ensembl: | ENSG00000070214 |
Gene Name: | SLC44A1 |
Gene Alias: | CD92|CDW92|CHTL1|CTL1 |
Gene Description: | solute carrier family 44 member 1 |
Gene Type: | protein-coding |
CpG%: | 0.08 |
GC%: | 0.656716 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |