TSS: Hg 101831.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.035 |distance_to_tss=-1583 |entrez_id=55151 |gc_percent=0.378109 |gene_alias=C9orf87|D4Ertd89e|OI14|TRIC-B|TRICB|bA219P18.1 |gene_description=transm...") |
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{{TSSDetail | {{TSSDetail | ||
|D4Ertd89e= | |||
|OI14= | |||
|TRIC-B= | |||
|TRICB= | |||
|bA219P18.1= | |||
|chr=chr9 | |||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
|distance_to_tss=- | |distance=NA | ||
|distance_to_tss=-1599 | |||
|end=105692943 | |||
|end_of_center_position=105692943 | |||
|entrez_id=55151 | |entrez_id=55151 | ||
|gc_percent=0.378109 | |gc_percent=0.378109 | ||
|gene_alias=C9orf87 | |gene_alias=C9orf87{{!}}D4Ertd89e{{!}}OI14{{!}}TRIC-B{{!}}TRICB{{!}}bA219P18.1 | ||
|gene_description=transmembrane protein 38B | |gene_description=transmembrane protein 38B | ||
|gene_name=TMEM38B | |gene_name=TMEM38B | ||
| Line 12: | Line 21: | ||
|nearest_refseq=NM_018112 | |nearest_refseq=NM_018112 | ||
|nearest_unigene=Hs.411925 | |nearest_unigene=Hs.411925 | ||
|num_trans=0 | |||
|species=human | |||
|start=105692941 | |||
|start_of_center_position=105692942 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101831.1 | |tss_id=hg_101831.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:49, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -1599 |
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| Nearest PromoterID: | NM_018112 |
| Entrez ID: | 55151 |
| Nearest Unigene: | Hs.411925 |
| Nearest Refseq: | NM_018112 |
| Nearest Ensembl: | ENSG00000095209 |
| Gene Name: | TMEM38B |
| Gene Alias: | C9orf87|D4Ertd89e|OI14|TRIC-B|TRICB|bA219P18.1 |
| Gene Description: | transmembrane protein 38B |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.378109 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |