TSS: Hg 81298.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |chr=chr7 |cpg_percent=0.065 |distance= |distance_to_tss=37397 |end=134928809 |entrez_id=800 |gc_percent=0.58209 |gene_alias=CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 |gene_...") |
No edit summary |
||
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|H-CAD= | |||
|HCAD= | |||
|L-CAD= | |||
|LCAD= | |||
|NAG22= | |||
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
|distance= | |distance=NA | ||
|distance_to_tss= | |distance_to_tss=37339 | ||
|end=134928809 | |end=134928809 | ||
|end_of_center_position=134928797 | |||
|entrez_id=800 | |entrez_id=800 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
|gene_alias=CDM | |gene_alias=CDM{{!}}H-CAD{{!}}HCAD{{!}}L-CAD{{!}}LCAD{{!}}NAG22 | ||
|gene_description=caldesmon 1 | |gene_description=caldesmon 1 | ||
|gene_name=CALD1 | |gene_name=CALD1 | ||
| Line 18: | Line 24: | ||
|species=human | |species=human | ||
|start=134928784 | |start=134928784 | ||
|start_of_center_position=134928796 | |||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name= | ||
Latest revision as of 15:02, 18 June 2021
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 37339 |
|---|---|
| Nearest PromoterID: | NM_033140 |
| Entrez ID: | 800 |
| Nearest Unigene: | Hs.490203 |
| Nearest Refseq: | NM_004342 |
| Nearest Ensembl: | ENSG00000122786 |
| Gene Name: | CALD1 |
| Gene Alias: | CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 |
| Gene Description: | caldesmon 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |