TSS: Hg 101862.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=11 |entrez_id=10880 |gc_percent=0.631841 |gene_alias=Tact1 |gene_description=actin like 7B |gene_name=ACTL7B |gene_type=protein-...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=HGNC:162 | |||
|chr=chr9 | |||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance_to_tss= | |distance=0 | ||
|distance_to_tss=2 | |||
|end=108855989 | |||
|end_of_center_position=108855984 | |||
|entrez_id=10880 | |entrez_id=10880 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
|gene_alias=Tact1 | |gene_alias=Tact1 | ||
|gene_description=actin like 7B | |gene_description=actin like 7B | ||
|gene_name=ACTL7B | |gene_id=10880 | ||
|gene_name=actin like 7B | |||
|gene_source=HGNC:162 | |||
|gene_symbol=ACTL7B | |||
|gene_synonyms=Tact1 | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:162 | |||
|nearest_ensembl=ENSG00000148156 | |nearest_ensembl=ENSG00000148156 | ||
|nearest_promoter_id=NM_006686 | |nearest_promoter_id=NM_006686 | ||
|nearest_refseq=NM_006686 | |nearest_refseq=NM_006686 | ||
|nearest_unigene=Hs.534390 | |nearest_unigene=Hs.534390 | ||
|num_trans=10880 | |||
|species=human | |||
|start=108855978 | |||
|start_of_center_position=108855983 | |||
|strand=- | |||
|transcript_name=ENST00000374667.5 AK313871 | |||
|tss_classification=yes | |||
|tss_id=hg_101862.1 | |tss_id=hg_101862.1 | ||
|tss_score=1 | |||
|uniprot_id=A0A140VKC6 Q9Y614 | |||
}} | }} | ||
Latest revision as of 18:14, 19 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 2 |
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| Nearest PromoterID: | NM_006686 |
| Entrez ID: | 10880 |
| Nearest Unigene: | Hs.534390 |
| Nearest Refseq: | NM_006686 |
| Nearest Ensembl: | ENSG00000148156 |
| Gene Name: | actin like 7B |
| Gene Alias: | Tact1 |
| Gene Description: | actin like 7B |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.