TSS: Rfhg 103976.1: Difference between revisions
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{{TSSDetailV4 | {{TSSDetailV4 | ||
|all_trans=ENST00000671237.1:0 ENST00000517798.1:6 ENST00000517747.5:-130 ENST00000505114.6:-151 ENST00000499554.6:-151 NR_125430.1:-151 NR_125429.1:-151 ENST00000649327.1:-330 | |||
|annotation=promoter-TSS (NM_001127505) | |annotation=promoter-TSS (NM_001127505) | ||
|ccre_category=PLS | |ccre_category=PLS | ||
| Line 15: | Line 16: | ||
|gene_description=N-acylsphingosine amidohydrolase 1 | |gene_description=N-acylsphingosine amidohydrolase 1 | ||
|gene_id=101929066 | |gene_id=101929066 | ||
|gene_name=ASAH1 | |gene_name=ASAH1 antisense RNA 1 | ||
|gene_source=EntrezGene:101929066 | |gene_source=EntrezGene:101929066 | ||
|gene_symbol=ASAH1-AS1 | |gene_symbol=ASAH1-AS1 | ||
| Line 21: | Line 22: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id= | |hgnc_mgi_id= | ||
|methods=CAGE | |||
|nearest_ensembl=ENSG00000104763 | |nearest_ensembl=ENSG00000104763 | ||
|nearest_promoter_id=NM_004315 | |nearest_promoter_id=NM_004315 | ||
|nearest_refseq=NM_004315 | |nearest_refseq=NM_004315 | ||
|nearest_transcripts=ENST00000517798.1:6 ENST00000517747.5:-130 ENST00000505114.6:-151 ENST00000499554.6:-151 NR_125430.1:-151 NR_125429.1:-151 ENST00000649327.1:-330 | |||
|nearest_unigene=Hs.527412 | |nearest_unigene=Hs.527412 | ||
|peak_score=1 | |peak_score=1 | ||
|reftss_version=4 | |reftss_version=4 | ||
|source_datasets=FANTOM5 | |||
|species=human | |species=human | ||
|start=18085019 | |start=18085019 | ||
Latest revision as of 12:18, 13 March 2025
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D4066645,EH38E2613636) |
|---|---|
| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -70 |
|---|---|
| Nearest PromoterID: | NM_004315 |
| Entrez ID: | 427 |
| Nearest Unigene: | Hs.527412 |
| Nearest Refseq: | NM_004315 |
| Nearest Ensembl: | ENSG00000104763 |
| Gene Name: | ASAH1 antisense RNA 1 |
| Gene Alias: | AC|ACDase|ASAH|PHP|PHP32|SMAPME |
| Gene Type: | protein-coding |
| CpG%: | 0.000000 |
| GC%: | 0.360000 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.