TSS: Hg 101884.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|EHM2= | |||
|chr=chr9 | |||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
|distance=NA | |||
|distance_to_tss=65371 | |distance_to_tss=65371 | ||
|end=109255599 | |||
|end_of_center_position=109255594 | |||
|entrez_id=54566 | |entrez_id=54566 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
|gene_alias=CG1 | |gene_alias=CG1{{!}}EHM2 | ||
|gene_description=erythrocyte membrane protein band 4.1 like 4B | |gene_description=erythrocyte membrane protein band 4.1 like 4B | ||
|gene_name=EPB41L4B | |gene_name=EPB41L4B | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000095203 | |nearest_ensembl=ENSG00000095203 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_019114 | ||
|nearest_refseq=NM_018424 | |nearest_refseq=NM_018424 | ||
|nearest_unigene=Hs.591901 | |nearest_unigene=Hs.591901 | ||
|tata_box= | |num_trans=0 | ||
|species=human | |||
|start=109255587 | |||
|start_of_center_position=109255593 | |||
|strand=- | |||
|tata_box=-98(TCCTCTTTAAGG,-,0.00),-95(TCTTTAAGGGAC,+,0.00) | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101884.1 | |tss_id=hg_101884.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:50, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 65371 |
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| Nearest PromoterID: | NM_019114 |
| Entrez ID: | 54566 |
| Nearest Unigene: | Hs.591901 |
| Nearest Refseq: | NM_018424 |
| Nearest Ensembl: | ENSG00000095203 |
| Gene Name: | EPB41L4B |
| Gene Alias: | CG1|EHM2 |
| Gene Description: | erythrocyte membrane protein band 4.1 like 4B |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -98(TCCTCTTTAAGG,-,0.00),-95(TCTTTAAGGGAC,+,0.00) |