TSS: Rfhg 11501.1: Difference between revisions

Latest revision as of 19:13, 6 December 2023

Basic information about the TSS

TSS ID:	rfhg_11501.1
Species:	human
Chr:	chr1

Start:	119646106
End:	119646127
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	pELS (EH38D2218040,EH38E1381529)
Category:	pELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Transcript_name:
Distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:

Gene_name:	ZNF697
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	2150
Nearest PromoterID:	NM_001080470
Entrez ID:	90874
Nearest Unigene:	Hs.381105
Nearest Refseq:	NM_001080470
Nearest Ensembl:	ENSG00000143067
Gene Name:	ZNF697
Gene Alias:	-
Gene Description:	zinc finger protein 697
Gene Type:	protein-coding
CpG%:	0.095238
GC%:	0.636364
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 21: / Line 21: @@
 |gene_type=protein-coding
 |hgnc_mgi_id=
+|methods=CAGE
 |nearest_ensembl=ENSG00000143067
 |nearest_promoter_id=NM_001080470
@@ Line 27: / Line 28: @@
 |peak_score=1
 |reftss_version=4
+|source_datasets=FANTOM5
 |species=human
 |start=119646106