TSS: Rfhg 115152.1: Difference between revisions
From referenceTSS
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|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:23643 | |hgnc_mgi_id=HGNC:23643 | ||
|methods=TSS_database | |||
|nearest_ensembl=ENSG00000180071 | |nearest_ensembl=ENSG00000180071 | ||
|nearest_promoter_id=NM_001331100 | |nearest_promoter_id=NM_001331100 | ||
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|peak_score=1 | |peak_score=1 | ||
|reftss_version=4 | |reftss_version=4 | ||
|source_datasets=EPD | |||
|species=human | |species=human | ||
|start=38620246 | |start=38620246 |
Latest revision as of 19:15, 6 December 2023
Basic information about the TSS
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Source datasets | EPD | |||||||||||||
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Protocol | TSS_database | |||||||||||||
TSS cluster detected* | 1 |
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
Description: | pELS,CTCF-bound (EH38D4190826,EH38E2694034) |
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Category: | pELS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 350 |
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Nearest PromoterID: | NM_001331100 |
Entrez ID: | 253650 |
Nearest Unigene: | Hs.644630 |
Nearest Refseq: | NM_147195 |
Nearest Ensembl: | ENSG00000180071 |
Gene Name: | ANKRD18A |
Gene Alias: | - |
Gene Description: | ankyrin repeat domain 18A |
Gene Type: | protein-coding |
CpG%: | 0.000000 |
GC%: | 1.000000 |
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.