TSS: Hg 1019.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=104806 |entrez_id=81569 |gc_percent=0.527363 |gene_alias=CT57 |gene_description=actin like 8 |gene_name=ACTL8 |gene_type=protein-co...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr1 | |||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=104786 | |||
|end=17860120 | |||
|end_of_center_position=17860119 | |||
|entrez_id=81569 | |entrez_id=81569 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_030812 | |nearest_refseq=NM_030812 | ||
|nearest_unigene=Hs.2149 | |nearest_unigene=Hs.2149 | ||
|num_trans=0 | |||
|species=human | |||
|start=17860117 | |||
|start_of_center_position=17860118 | |||
|strand=+ | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_1019.1 | |tss_id=hg_1019.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:50, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 104786 |
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| Nearest PromoterID: | NM_030812 |
| Entrez ID: | 81569 |
| Nearest Unigene: | Hs.2149 |
| Nearest Refseq: | NM_030812 |
| Nearest Ensembl: | ENSG00000117148 |
| Gene Name: | ACTL8 |
| Gene Alias: | CT57 |
| Gene Description: | actin like 8 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |