TSS: Hg 88398.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000459299.1:0 NR_003041:0 uc033bhd.1:0 |chr=chr8 |cpg_percent=0.04 |distance=0 |distance_to_tss=1 |end=33513478 |entrez_id=692084 |gc_percent=0.42...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |SNORD13A= | ||
|U13= | |||
|all_trans=HGNC:32711 | |||
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=1 | |distance_to_tss=1 | ||
|end=33513478 | |end=33513478 | ||
|end_of_center_position=33513476 | |||
|entrez_id=692084 | |entrez_id=692084 | ||
|gc_percent=0.427861 | |gc_percent=0.427861 | ||
|gene_alias=RNU13 | |gene_alias=RNU13{{!}}SNORD13A{{!}}U13 | ||
|gene_description= | |gene_description=small nucleolar RNA, C/D box 13 | ||
|gene_id=692084 | |gene_id=692084 | ||
|gene_name= | |gene_name=small nucleolar RNA, C/D box 13 | ||
|gene_source=HGNC:32711 | |gene_source=HGNC:32711 | ||
|gene_symbol=SNORD13 | |gene_symbol=SNORD13 | ||
| Line 21: | Line 24: | ||
|nearest_refseq=NR_003041 | |nearest_refseq=NR_003041 | ||
|nearest_unigene= | |nearest_unigene= | ||
|num_trans= | |num_trans=692084 | ||
|species=human | |species=human | ||
|start=33513473 | |start=33513473 | ||
|start_of_center_position=33513475 | |||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000459299 | |transcript_name=ENST00000459299.1 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_88398.1 | |tss_id=hg_88398.1 | ||
Latest revision as of 14:30, 22 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 1 |
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| Nearest PromoterID: | NR_003041 |
| Entrez ID: | 692084 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_003041 |
| Nearest Ensembl: | ENSG00000239039 |
| Gene Name: | small nucleolar RNA, C/D box 13 |
| Gene Alias: | RNU13|SNORD13A|U13 |
| Gene Description: | small nucleolar RNA, C/D box 13 |
| Gene Type: | snoRNA |
| CpG%: | 0.04 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.