TSS: Hg 88470.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_004095:0 BC004459:0 AB044548:0 AK312011:0 BC058073:0 DQ893731:0 DQ890570:0 AB590574:0 KJ891096:0 BT007162:0 CR456769:0 L36055:0 ENST00000338825.4:-15...") |
No edit summary |
||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|all_trans= | |4EBP1= | ||
|BP-1= | |||
|PHAS-I= | |||
|all_trans=HGNC:3288 | |||
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
|distance=0 | |distance=0 | ||
|distance_to_tss= | |distance_to_tss=2 | ||
|end=38030574 | |end=38030574 | ||
|end_of_center_position=38030537 | |||
|entrez_id=1978 | |entrez_id=1978 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
|gene_alias=4E-BP1 | |gene_alias=4E-BP1{{!}}4EBP1{{!}}BP-1{{!}}PHAS-I | ||
|gene_description=eukaryotic translation initiation factor 4E binding protein 1 | |gene_description=eukaryotic translation initiation factor 4E binding protein 1 | ||
|gene_id=1978 | |gene_id=1978 | ||
| Line 21: | Line 25: | ||
|nearest_refseq=NM_004095 | |nearest_refseq=NM_004095 | ||
|nearest_unigene=Hs.411641 | |nearest_unigene=Hs.411641 | ||
|num_trans= | |num_trans=1978 | ||
|species=human | |species=human | ||
|start=38030498 | |start=38030498 | ||
|start_of_center_position=38030536 | |||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name=ENST00000338825.5 BC004459 AB044548 AK312011 BC058073 DQ893731 DQ890570 AB590574 BT007162 CR456769 L36055 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_88470.1 | |tss_id=hg_88470.1 | ||
Latest revision as of 14:31, 22 July 2021
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_004095 |
| Entrez ID: | 1978 |
| Nearest Unigene: | Hs.411641 |
| Nearest Refseq: | NM_004095 |
| Nearest Ensembl: | ENSG00000187840 |
| Gene Name: | eukaryotic translation initiation factor 4E binding protein 1 |
| Gene Alias: | 4E-BP1|4EBP1|BP-1|PHAS-I |
| Gene Description: | eukaryotic translation initiation factor 4E binding protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.