TSS: Hg 101919.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=8398 |entrez_id=7295 |gc_percent=0.348259 |gene_alias=TRDX|TRX|TRX1 |gene_description=thioredoxin |gene_name=TXN |gene_type=pro...") |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|TRX= | |||
|TRX1= | |||
|chr=chr9 | |||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=8265 | |||
|end=110248253 | |||
|end_of_center_position=110248242 | |||
|entrez_id=7295 | |entrez_id=7295 | ||
|gc_percent=0.348259 | |gc_percent=0.348259 | ||
|gene_alias=TRDX | |gene_alias=TRDX{{!}}TRX{{!}}TRX1 | ||
|gene_description=thioredoxin | |gene_description=thioredoxin | ||
|gene_name=TXN | |gene_name=TXN | ||
Line 12: | Line 18: | ||
|nearest_refseq=NM_003329 | |nearest_refseq=NM_003329 | ||
|nearest_unigene=Hs.435136 | |nearest_unigene=Hs.435136 | ||
|num_trans=0 | |||
|species=human | |||
|start=110248230 | |||
|start_of_center_position=110248241 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101919.1 | |tss_id=hg_101919.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 16:51, 15 June 2021
Basic information about the TSS
|
| |||||||||||||
TSS cluster detected* |
---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
Distance to TSS: | 8265 |
---|---|
Nearest PromoterID: | NM_003329 |
Entrez ID: | 7295 |
Nearest Unigene: | Hs.435136 |
Nearest Refseq: | NM_003329 |
Nearest Ensembl: | ENSG00000136810 |
Gene Name: | TXN |
Gene Alias: | TRDX|TRX|TRX1 |
Gene Description: | thioredoxin |
Gene Type: | protein-coding |
CpG%: | 0.015 |
GC%: | 0.348259 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |