TSS: Hg 101920.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=7516 |entrez_id=7295 |gc_percent=0.422886 |gene_alias=TRDX|TRX|TRX1 |gene_description=thioredoxin |gene_name=TXN |gene_type=prot...") |
No edit summary |
||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|TRX= | |||
|TRX1= | |||
|chr=chr9 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=7383 | |||
|end=110249125 | |||
|end_of_center_position=110249125 | |||
|entrez_id=7295 | |entrez_id=7295 | ||
|gc_percent=0.422886 | |gc_percent=0.422886 | ||
|gene_alias=TRDX | |gene_alias=TRDX{{!}}TRX{{!}}TRX1 | ||
|gene_description=thioredoxin | |gene_description=thioredoxin | ||
|gene_name=TXN | |gene_name=TXN | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_003329 | |nearest_refseq=NM_003329 | ||
|nearest_unigene=Hs.435136 | |nearest_unigene=Hs.435136 | ||
|num_trans=0 | |||
|species=human | |||
|start=110249123 | |||
|start_of_center_position=110249124 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101920.1 | |tss_id=hg_101920.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:51, 15 June 2021
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 7383 |
|---|---|
| Nearest PromoterID: | NM_003329 |
| Entrez ID: | 7295 |
| Nearest Unigene: | Hs.435136 |
| Nearest Refseq: | NM_003329 |
| Nearest Ensembl: | ENSG00000136810 |
| Gene Name: | TXN |
| Gene Alias: | TRDX|TRX|TRX1 |
| Gene Description: | thioredoxin |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.422886 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |