TSS: Hg 101928.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|TRX6= | |||
|bA427L11.2= | |||
|chr=chr9 | |||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance=NA | |||
|distance_to_tss=-37580 | |distance_to_tss=-37580 | ||
|end=110375466 | |||
|end_of_center_position=110375465 | |||
|entrez_id=255220 | |entrez_id=255220 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
|gene_alias=SPTRX-3 | |gene_alias=SPTRX-3{{!}}SPTRX3{{!}}TRX6{{!}}bA427L11.2 | ||
|gene_description=thioredoxin domain containing 8 | |gene_description=thioredoxin domain containing 8 | ||
|gene_name=TXNDC8 | |gene_name=TXNDC8 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000204193 | |nearest_ensembl=ENSG00000204193 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001286947 | ||
|nearest_refseq=NM_001003936 | |nearest_refseq=NM_001003936 | ||
|nearest_unigene=Hs.147064 | |nearest_unigene=Hs.147064 | ||
|num_trans=0 | |||
|species=human | |||
|start=110375462 | |||
|start_of_center_position=110375464 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101928.1 | |tss_id=hg_101928.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:51, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -37580 |
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| Nearest PromoterID: | NM_001286947 |
| Entrez ID: | 255220 |
| Nearest Unigene: | Hs.147064 |
| Nearest Refseq: | NM_001003936 |
| Nearest Ensembl: | ENSG00000204193 |
| Gene Name: | TXNDC8 |
| Gene Alias: | SPTRX-3|SPTRX3|TRX6|bA427L11.2 |
| Gene Description: | thioredoxin domain containing 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |