TSS: Hg 101931.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|CCP22= | |||
|POLYDOM= | |||
|SEL-OB= | |||
|SELOB= | |||
|chr=chr9 | |||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=616 | |||
|end=110579135 | |||
|end_of_center_position=110579126 | |||
|entrez_id=79987 | |entrez_id=79987 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
|gene_alias=C9orf13 | |gene_alias=C9orf13{{!}}CCP22{{!}}POLYDOM{{!}}SEL-OB{{!}}SELOB | ||
|gene_description= | |gene_description=sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 | ||
|gene_name=SVEP1 | |gene_name=SVEP1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 12: | Line 20: | ||
|nearest_refseq=NM_153366 | |nearest_refseq=NM_153366 | ||
|nearest_unigene=Hs.522334 | |nearest_unigene=Hs.522334 | ||
|num_trans=0 | |||
|species=human | |||
|start=110579115 | |||
|start_of_center_position=110579125 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_101931.1 | |tss_id=hg_101931.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:51, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 616 |
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| Nearest PromoterID: | NM_153366 |
| Entrez ID: | 79987 |
| Nearest Unigene: | Hs.522334 |
| Nearest Refseq: | NM_153366 |
| Nearest Ensembl: | ENSG00000165124 |
| Gene Name: | SVEP1 |
| Gene Alias: | C9orf13|CCP22|POLYDOM|SEL-OB|SELOB |
| Gene Description: | sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |