TSS: Rfhg 189345.1: Difference between revisions

Latest revision as of 18:10, 7 December 2023

Basic information about the TSS

TSS ID:	rfhg_189345.1
Species:	human
Chr:	chr17

Start:	7578649
End:	7578687
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Transcript_name:
Distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:

Gene_name:	SNORA67
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	713
Nearest PromoterID:	NR_002912
Entrez ID:	26781
Nearest Unigene:	Hs.129673
Nearest Refseq:	NR_002912
Nearest Ensembl:	ENSG00000277985
Gene Name:	SNORA67
Gene Alias:	RNU67\|U67
Gene Description:	small nucleolar RNA, H/ACA box 67
Gene Type:	snoRNA
CpG%:	0.026316
GC%:	0.615385
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 21: / Line 21: @@
 |gene_type=snoRNA
 |hgnc_mgi_id=
+|methods=CAGE
 |nearest_ensembl=ENSG00000277985
 |nearest_promoter_id=NR_002912
@@ Line 27: / Line 28: @@
 |peak_score=1
 |reftss_version=4
+|source_datasets=FANTOM5
 |species=human
 |start=7578649