TSS: Hg 96562.1: Difference between revisions

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(Created page with "{{TSSDetail |all_trans=BC045643:0 AK097595:0 AK302123:0 ENST00000378745.3:-13 uc064svm.1:-13 ENST00000312292.5:-18 NM_203299:-18 NM_001040410:-18 uc003zvw.4:-18 ENST0000041653...")
 
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{{TSSDetail
{{TSSDetail
|all_trans=BC045643:0 AK097595:0 AK302123:0 ENST00000378745.3:-13 uc064svm.1:-13 ENST00000312292.5:-18 NM_203299:-18 NM_001040410:-18 uc003zvw.4:-18 ENST00000416537.2:203 NM_001287391:203 uc064svn.1:203
|all_trans=HGNC:31418
|chr=chr9
|chr=chr9
|cpg_percent=0
|cpg_percent=0
|distance=0
|distance=0
|distance_to_tss=39
|distance_to_tss=7
|end=35042269
|end=35042269
|end_of_center_position=35042248
|entrez_id=138724
|entrez_id=138724
|gc_percent=0.552239
|gc_percent=0.552239
Line 18: Line 19:
|hgnc_mgi_id=HGNC:31418
|hgnc_mgi_id=HGNC:31418
|nearest_ensembl=ENSG00000174038
|nearest_ensembl=ENSG00000174038
|nearest_promoter_id=NM_203299
|nearest_promoter_id=NM_001287391
|nearest_refseq=NM_203299
|nearest_refseq=NM_203299
|nearest_unigene=Hs.148250
|nearest_unigene=Hs.148250
|num_trans=12
|num_trans=138724
|species=human
|species=human
|start=35042225
|start=35042225
|start_of_center_position=35042247
|strand=+
|strand=+
|transcript_name=BC045643 AK097595 AK302123
|transcript_name=ENST00000312292.6 BC045643 AK097595 AK302123
|tss_classification=no
|tss_classification=no
|tss_id=hg_96562.1
|tss_id=hg_96562.1
|tss_score=1
|tss_score=1
|uniprot_id=B4DXT9
|uniprot_id=B4DXT9 Q5VYM1
}}
}}

Latest revision as of 17:27, 22 July 2021

Basic information about the TSS


TSS ID:hg_96562.1
Species:human
Chr:chr9
Start:35042225
End:35042269
Strand:+
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation


Transcript_name:ENST00000312292.6 BC045643 AK097595 AK302123
Distance:0
GeneID:138724
HGNC/MGI_ID:HGNC:31418
UniProt_ID:B4DXT9 Q5VYM1
Gene_name:chromosome 9 open reading frame 131
Gene_symbol:C9orf131
Gene_synonyms:MGC41945
Gene_source:HGNC:31418



TATA-Box annotation


Distance to TSS:7
Nearest PromoterID:NM_001287391
Entrez ID:138724
Nearest Unigene:Hs.148250
Nearest Refseq:NM_203299
Nearest Ensembl:ENSG00000174038
Gene Name:chromosome 9 open reading frame 131
Gene Alias:-
Gene Description:chromosome 9 open reading frame 131
Gene Type:protein-coding
CpG%:0
GC%:0.552239
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.