TSS: Hg 98085.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |all_trans=HGNC:18232 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
|distance=0 | |distance=0 | ||
|distance_to_tss= | |distance_to_tss=10 | ||
|end=113349588 | |end=113349588 | ||
|end_of_center_position=113349552 | |||
|entrez_id=54836 | |entrez_id=54836 | ||
|gc_percent=0.835821 | |gc_percent=0.835821 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=HGNC:18232 | |hgnc_mgi_id=HGNC:18232 | ||
|nearest_ensembl=ENSG00000119411 | |nearest_ensembl=ENSG00000119411 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001317943 | ||
|nearest_refseq=NM_017688 | |nearest_refseq=NM_017688 | ||
|nearest_unigene=Hs.614517 | |nearest_unigene=Hs.614517 | ||
|num_trans= | |num_trans=54836 | ||
|species=human | |species=human | ||
|start=113349514 | |start=113349514 | ||
|start_of_center_position=113349551 | |||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000374183. | |transcript_name=ENST00000374183.5 ENST00000462085.1 AK092607 BC001477 AJ276691 AB527588 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_98085.1 | |tss_id=hg_98085.1 | ||
Latest revision as of 18:00, 22 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 10 |
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| Nearest PromoterID: | NM_001317943 |
| Entrez ID: | 54836 |
| Nearest Unigene: | Hs.614517 |
| Nearest Refseq: | NM_017688 |
| Nearest Ensembl: | ENSG00000119411 |
| Gene Name: | B-box and SPRY domain containing |
| Gene Alias: | - |
| Gene Description: | B-box and SPRY domain containing |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.835821 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.