TSS: Hg 100014.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|HMGIC/NFIB= | |HMGIC/NFIB= | ||
|MACID= | |||
|NF-I/B= | |NF-I/B= | ||
|NF1-B= | |NF1-B= | ||
| Line 9: | Line 10: | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance= | |distance=NA | ||
|distance_to_tss= | |distance_to_tss=33312 | ||
|end=14498768 | |end=14498768 | ||
|end_of_center_position=14498766 | |||
|entrez_id=4781 | |entrez_id=4781 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
|gene_alias=CTF | |gene_alias=CTF{{!}}HMGIC/NFIB{{!}}MACID{{!}}NF-I/B{{!}}NF1-B{{!}}NFI-B{{!}}NFI-RED{{!}}NFIB2{{!}}NFIB3 | ||
|gene_description=nuclear factor I B | |gene_description=nuclear factor I B | ||
|gene_name=NFIB | |gene_name=NFIB | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000147862 | |nearest_ensembl=ENSG00000147862 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001369458 | ||
|nearest_refseq=NM_005596 | |nearest_refseq=NM_005596 | ||
|nearest_unigene=Hs.644095 | |nearest_unigene=Hs.644095 | ||
| Line 25: | Line 27: | ||
|species=human | |species=human | ||
|start=14498762 | |start=14498762 | ||
|start_of_center_position=14498765 | |||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name= | ||
Latest revision as of 16:08, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 33312 |
|---|---|
| Nearest PromoterID: | NM_001369458 |
| Entrez ID: | 4781 |
| Nearest Unigene: | Hs.644095 |
| Nearest Refseq: | NM_005596 |
| Nearest Ensembl: | ENSG00000147862 |
| Gene Name: | NFIB |
| Gene Alias: | CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 |
| Gene Description: | nuclear factor I B |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |