TSS: Hg 100089.1: Difference between revisions
From referenceTSS
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
|distance= | |distance=NA | ||
|distance_to_tss=- | |distance_to_tss=-247 | ||
|end=15552801 | |end=15552801 | ||
|end_of_center_position=15552796 | |||
|entrez_id=203238 | |entrez_id=203238 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
|gene_alias=C9orf93 | |gene_alias=C9orf93{{!}}bA536D16.1{{!}}bA778P13.1 | ||
|gene_description=coiled-coil domain containing 171 | |gene_description=coiled-coil domain containing 171 | ||
|gene_name=CCDC171 | |gene_name=CCDC171 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000164989 | |nearest_ensembl=ENSG00000164989 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001348002 | ||
|nearest_refseq=NM_173550 | |nearest_refseq=NM_173550 | ||
|nearest_unigene=Hs.17267 | |nearest_unigene=Hs.17267 | ||
| Line 20: | Line 21: | ||
|species=human | |species=human | ||
|start=15552790 | |start=15552790 | ||
|start_of_center_position=15552795 | |||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name= | ||
Latest revision as of 16:10, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -247 |
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| Nearest PromoterID: | NM_001348002 |
| Entrez ID: | 203238 |
| Nearest Unigene: | Hs.17267 |
| Nearest Refseq: | NM_173550 |
| Nearest Ensembl: | ENSG00000164989 |
| Gene Name: | CCDC171 |
| Gene Alias: | C9orf93|bA536D16.1|bA778P13.1 |
| Gene Description: | coiled-coil domain containing 171 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |