TSS: Hg 102018.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.07 |distance_to_tss=628 |entrez_id=158399 |gc_percent=0.567164 |gene_alias=ZKSCAN16|ZSCAN48 |gene_description=zinc finger protein 483 |gene_name=ZNF...") |
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{{TSSDetail | {{TSSDetail | ||
|ZSCAN48= | |||
|chr=chr9 | |||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=608 | |||
|end=111525794 | |||
|end_of_center_position=111525787 | |||
|entrez_id=158399 | |entrez_id=158399 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
|gene_alias=ZKSCAN16 | |gene_alias=ZKSCAN16{{!}}ZSCAN48 | ||
|gene_description=zinc finger protein 483 | |gene_description=zinc finger protein 483 | ||
|gene_name=ZNF483 | |gene_name=ZNF483 | ||
Line 12: | Line 17: | ||
|nearest_refseq=NM_133464 | |nearest_refseq=NM_133464 | ||
|nearest_unigene=Hs.584864 | |nearest_unigene=Hs.584864 | ||
|num_trans=0 | |||
|species=human | |||
|start=111525779 | |||
|start_of_center_position=111525786 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102018.1 | |tss_id=hg_102018.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 16:53, 15 June 2021
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 608 |
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Nearest PromoterID: | NM_133464 |
Entrez ID: | 158399 |
Nearest Unigene: | Hs.584864 |
Nearest Refseq: | NM_133464 |
Nearest Ensembl: | ENSG00000173258 |
Gene Name: | ZNF483 |
Gene Alias: | ZKSCAN16|ZSCAN48 |
Gene Description: | zinc finger protein 483 |
Gene Type: | protein-coding |
CpG%: | 0.07 |
GC%: | 0.567164 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |