TSS: Hg 100202.1: Difference between revisions
From referenceTSS
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
|distance= | |distance=NA | ||
|distance_to_tss=- | |distance_to_tss=-1177 | ||
|end=20623695 | |end=20623695 | ||
|end_of_center_position=20623677 | |||
|entrez_id=4300 | |entrez_id=4300 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
|gene_alias=AF9 | |gene_alias=AF9{{!}}YEATS3 | ||
|gene_description= | |gene_description=MLLT3 super elongation complex subunit | ||
|gene_name=MLLT3 | |gene_name=MLLT3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 19: | Line 20: | ||
|species=human | |species=human | ||
|start=20623657 | |start=20623657 | ||
|start_of_center_position=20623676 | |||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-27(TCCTTTTTAAAG,-,0.00),-26(CCTTTTTAAAGG,-,0.00),-25(CTTTTTAAAGGT,+,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=yes | |tss_classification=yes | ||
Latest revision as of 16:12, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -1177 |
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| Nearest PromoterID: | NM_004529 |
| Entrez ID: | 4300 |
| Nearest Unigene: | Hs.317248 |
| Nearest Refseq: | NM_004529 |
| Nearest Ensembl: | ENSG00000171843 |
| Gene Name: | MLLT3 |
| Gene Alias: | AF9|YEATS3 |
| Gene Description: | MLLT3 super elongation complex subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -27(TCCTTTTTAAAG,-,0.00),-26(CCTTTTTAAAGG,-,0.00),-25(CTTTTTAAAGGT,+,0.00) |