TSS: Mm 100795.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=EF101556:-129 | |all_trans=LF225869:27 MA461446:27 EF101556:-129 LF225870:-180 MA461447:-180 LF225868:233 MA461445:233 LF225867:407 MA461444:407 | ||
|b2b1660Clo= | |||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance= | |distance=27 | ||
|distance_to_tss=-7475 | |distance_to_tss=-7475 | ||
|end=4940050 | |end=4940050 | ||
|end_of_center_position=4940046 | |||
|entrez_id=11764 | |entrez_id=11764 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
|gene_alias=Adtb1 | |gene_alias=Adtb1{{!}}b2b1660Clo | ||
|gene_description= | |gene_description=adaptor protein complex AP-1, beta 1 subunit | ||
|gene_id=380684 | |gene_id=380684 | ||
|gene_name= | |gene_name=Ap1b1 | ||
|gene_source=MGI:97309 | |gene_source=MGI:97309 | ||
|gene_symbol=Nefh | |gene_symbol=Nefh | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NM_007454 | |nearest_refseq=NM_007454 | ||
|nearest_unigene=Mm.274816 | |nearest_unigene=Mm.274816 | ||
|num_trans= | |num_trans=9 | ||
|species=mouse | |species=mouse | ||
|start=4940041 | |start=4940041 | ||
|start_of_center_position=4940045 | |||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=LF225869 MA461446 | ||
|tss_classification= | |tss_classification=yes | ||
|tss_id=mm_100795.1 | |tss_id=mm_100795.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 10:07, 16 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -7475 |
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| Nearest PromoterID: | NM_001243043 |
| Entrez ID: | 11764 |
| Nearest Unigene: | Mm.274816 |
| Nearest Refseq: | NM_007454 |
| Nearest Ensembl: | ENSMUSG00000009090 |
| Gene Name: | Ap1b1 |
| Gene Alias: | Adtb1|b2b1660Clo |
| Gene Description: | adaptor protein complex AP-1, beta 1 subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.