TSS: Hg 102039.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=20573 |entrez_id=100616114 |gc_percent=0.482587 |gene_alias=mir-4668 |gene_description=microRNA 4668 |gene_name=MIR4668 |gene_t...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=NA | |||
|distance_to_tss=20573 | |distance_to_tss=20573 | ||
|end=111952678 | |||
|end_of_center_position=111952673 | |||
|entrez_id=100616114 | |entrez_id=100616114 | ||
|gc_percent=0.482587 | |gc_percent=0.482587 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NR_039814 | |nearest_refseq=NR_039814 | ||
|nearest_unigene= | |nearest_unigene= | ||
|tata_box= | |num_trans=0 | ||
|species=human | |||
|start=111952667 | |||
|start_of_center_position=111952672 | |||
|strand=- | |||
|tata_box=-34(GCTTTAAGAGTC,+,0.00) | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102039.1 | |tss_id=hg_102039.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:54, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 20573 |
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| Nearest PromoterID: | NR_039814 |
| Entrez ID: | 100616114 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_039814 |
| Nearest Ensembl: | ENSG00000266315 |
| Gene Name: | MIR4668 |
| Gene Alias: | mir-4668 |
| Gene Description: | microRNA 4668 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.482587 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(GCTTTAAGAGTC,+,0.00) |