TSS: Hg 102059.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-1319 |entrez_id=64420 |gc_percent=0.40796 |gene_alias=- |gene_description=sushi domain containing 1 |gene_name=SUSD1 |gene_type...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=NA | |||
|distance_to_tss=-1319 | |distance_to_tss=-1319 | ||
|end=112176632 | |||
|end_of_center_position=112176617 | |||
|entrez_id=64420 | |entrez_id=64420 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
| Line 9: | Line 13: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000106868 | |nearest_ensembl=ENSG00000106868 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_022486 | ||
|nearest_refseq=NM_022486 | |nearest_refseq=NM_022486 | ||
|nearest_unigene=Hs.494827 | |nearest_unigene=Hs.494827 | ||
|num_trans=0 | |||
|species=human | |||
|start=112176600 | |||
|start_of_center_position=112176616 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102059.1 | |tss_id=hg_102059.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:54, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -1319 |
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| Nearest PromoterID: | NM_022486 |
| Entrez ID: | 64420 |
| Nearest Unigene: | Hs.494827 |
| Nearest Refseq: | NM_022486 |
| Nearest Ensembl: | ENSG00000106868 |
| Gene Name: | SUSD1 |
| Gene Alias: | - |
| Gene Description: | sushi domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |