TSS: Hg 100595.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 3: | Line 3: | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
|distance= | |distance=NA | ||
|distance_to_tss= | |distance_to_tss=1109 | ||
|end=35649826 | |end=35649826 | ||
|end_of_center_position=35649822 | |||
|entrez_id=27240 | |entrez_id=27240 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
|gene_alias=SIT | |gene_alias=SIT{{!}}SIT-R | ||
|gene_description=signaling threshold regulating transmembrane adaptor 1 | |gene_description=signaling threshold regulating transmembrane adaptor 1 | ||
|gene_name=SIT1 | |gene_name=SIT1 | ||
Line 19: | Line 20: | ||
|species=human | |species=human | ||
|start=35649817 | |start=35649817 | ||
|start_of_center_position=35649821 | |||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name= | ||
|tss_classification= | |tss_classification=yes | ||
|tss_id=hg_100595.1 | |tss_id=hg_100595.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} |
Latest revision as of 17:47, 12 July 2021
Basic information about the TSS
|
| |||||||||||||
TSS cluster detected* |
---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
Distance to TSS: | 1109 |
---|---|
Nearest PromoterID: | NM_014450 |
Entrez ID: | 27240 |
Nearest Unigene: | Hs.88012 |
Nearest Refseq: | NM_014450 |
Nearest Ensembl: | ENSG00000137078 |
Gene Name: | SIT1 |
Gene Alias: | SIT|SIT-R |
Gene Description: | signaling threshold regulating transmembrane adaptor 1 |
Gene Type: | protein-coding |
CpG%: | 0.045 |
GC%: | 0.666667 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |